Nucleic Acid Conformation

DNA Recombination Activity in Soybean Mitochondria

Molecular Biology / EM / Mitochondria / DNA / mtDNA / Soybean / Soybeans / Electrophoresis / Genetic Recombination / Gel electrophoresis / PFGE / Nucleic Acid Conformation / Biochemistry and cell biology / Ss / Soybean / Soybeans / Electrophoresis / Genetic Recombination / Gel electrophoresis / PFGE / Nucleic Acid Conformation / Biochemistry and cell biology / Ss

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RNase P-mediated inhibition of cytomegalovirus protease expression and viral DNA encapsidation by oligonucleotide external guide sequences

Gene expression / Multidisciplinary / Humans / Cytomegalovirus / Protease Inhibitors / Cytomegalovirus Infections / Base Sequence / Nucleic Acid Conformation / Nucleotides / Oligonucleotides / Cytomegalovirus Infections / Base Sequence / Nucleic Acid Conformation / Nucleotides / Oligonucleotides

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The mitochondrial genome sequence of the scorpion Centruroides limpidus (Karsch 1879) (Chelicerata; Arachnida

Genetics / Mitochondria / Phylogeny / Mitochondrial DNA / Animals / Arachnida / Gene Order / Phylogenetic analysis / Genome / Gene / Mitochondrial Genome / Secondary Structure / Control Region / Base Sequence / Nucleic Acid Conformation / Arachnida / Gene Order / Phylogenetic analysis / Genome / Gene / Mitochondrial Genome / Secondary Structure / Control Region / Base Sequence / Nucleic Acid Conformation

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Fluorescence energy transfer as a probe for nucleic acid structures and sequences

Fluorescent Dyes and Reagents / Biological Sciences / DNA / Environmental Sciences / Nucleic acid hybridization / Nucleic Acids / Coumarins / Energy Transfer / Base Sequence / Nucleic Acid Conformation / Nucleic Acid / Fluorescein / Molecular Sequence Data / Nucleic Acids / Coumarins / Energy Transfer / Base Sequence / Nucleic Acid Conformation / Nucleic Acid / Fluorescein / Molecular Sequence Data

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Local RNA Target Structure Influences siRNA Efficacy: A Systematic Global Analysis

Thermodynamics / Molecular Biology / Computational Biology / Gene Silencing / Global Analysis / Genetic Engineering / Molecular / RNA interference / Cercopithecus aethiops / Cell line / Humans / RNAi / Animals / Drug Design / Free Energy / Rats / dsRNA / Substrate Specificity / Fluorescent Protein / Transfection / siRNA / RNA Structure / Base Sequence / TRP / UTR / GFP / Nucleic Acid Conformation / Biochemistry and cell biology / Enterovirus / Genetic Engineering / Molecular / RNA interference / Cercopithecus aethiops / Cell line / Humans / RNAi / Animals / Drug Design / Free Energy / Rats / dsRNA / Substrate Specificity / Fluorescent Protein / Transfection / siRNA / RNA Structure / Base Sequence / TRP / UTR / GFP / Nucleic Acid Conformation / Biochemistry and cell biology / Enterovirus

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Local RNA Target Structure Influences siRNA Efficacy: A Systematic Global Analysis

Thermodynamics / Molecular Biology / Computational Biology / Gene Silencing / Global Analysis / Genetic Engineering / Molecular / RNA interference / Cercopithecus aethiops / Cell line / Humans / RNAi / Animals / Drug Design / Free Energy / Rats / dsRNA / Substrate Specificity / Fluorescent Protein / Transfection / siRNA / RNA Structure / Base Sequence / TRP / UTR / GFP / Nucleic Acid Conformation / Biochemistry and cell biology / Enterovirus / Genetic Engineering / Molecular / RNA interference / Cercopithecus aethiops / Cell line / Humans / RNAi / Animals / Drug Design / Free Energy / Rats / dsRNA / Substrate Specificity / Fluorescent Protein / Transfection / siRNA / RNA Structure / Base Sequence / TRP / UTR / GFP / Nucleic Acid Conformation / Biochemistry and cell biology / Enterovirus

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A nucleotide-level coarse-grained model of RNA

Engineering / Thermodynamics / RNA / Nanotechnology / Chemical Physics / DNA / Physical sciences / CHEMICAL SCIENCES / Nucleic Acid Conformation / Nucleotides / DNA / Physical sciences / CHEMICAL SCIENCES / Nucleic Acid Conformation / Nucleotides

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Phylogenetic analyses among octocorals (Cnidaria): mitochondrial and nuclear DNA sequences (lsu-rRNA, 16S and ssu-rRNA, 18S) support two convergent clades of branching gorgonians

Evolutionary Biology / Genetics / Zoology / RNA / Molecular Evolution / Scanning Electron Microscopy / DNA / Phylogeny / Mitochondrial DNA / Anthozoa / Escherichia coli / Animals / Molecular Phylogenetics and Evolution / nuclear DNA / Molecular phylogenetics / Deep water / Secondary Structure / Maximum Parsimony / Base Sequence / SSU rRNA / Nucleic Acid Conformation / DNA sequence / Molecular Sequence Data / Scanning Electron Microscopy / DNA / Phylogeny / Mitochondrial DNA / Anthozoa / Escherichia coli / Animals / Molecular Phylogenetics and Evolution / nuclear DNA / Molecular phylogenetics / Deep water / Secondary Structure / Maximum Parsimony / Base Sequence / SSU rRNA / Nucleic Acid Conformation / DNA sequence / Molecular Sequence Data

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Ribonucleotide sequences non-adjacent to poly (A) participate in the poly (A)-protein complex in 15S duck globin mRNP particles

Biological Sciences / Environmental Sciences / Animals / Nucleic Acids / Ducks / Protein Complex Detection / Molecular weight / Base Sequence / Ribonucleoproteins / Poly A / Nucleic Acid Conformation / Protein Complex Detection / Molecular weight / Base Sequence / Ribonucleoproteins / Poly A / Nucleic Acid Conformation

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A computational method to predict genetically encoded rare amino acids in proteins

Genetics / Computational Biology / Biological Sciences / Environmental Sciences / Sequence alignment / Archaea / Amino Acids / Lysine / Amino Acid Profile / Selenoproteins / Amino Acid Sequence / Proteome / Genetic Code / Nucleic Acid Conformation / Computational Method / Molecular Sequence Data / Archaea / Amino Acids / Lysine / Amino Acid Profile / Selenoproteins / Amino Acid Sequence / Proteome / Genetic Code / Nucleic Acid Conformation / Computational Method / Molecular Sequence Data

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I-PpoI, the endonuclease encoded by the group I intron PpLSU3, is expressed from an RNA polymerase I transcript

RNA / RNA polymerase / Gene expression / Biological Sciences / Saccharomyces cerevisiae / Molecular and cellular biology / Mutagenesis / Animals / Tetrahymena / Introns / RNA Polymerase I / Nucleic Acid Conformation / Physarum / Molecular and cellular biology / Mutagenesis / Animals / Tetrahymena / Introns / RNA Polymerase I / Nucleic Acid Conformation / Physarum

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Memory-efficient RNA energy landscape exploration

Bioinformatics / Algorithms / Thermodynamics / RNA / Computational Biology / Kinetics / Probability / Software / Nucleic Acid Conformation / Kinetics / Probability / Software / Nucleic Acid Conformation

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Phylogenetic analyses among octocorals (Cnidaria): mitochondrial and nuclear DNA sequences (lsu-rRNA, 16S and ssu-rRNA, 18S) support two convergent clades of branching gorgonians

Evolutionary Biology / Genetics / Zoology / RNA / Molecular Evolution / Scanning Electron Microscopy / DNA / Phylogeny / Mitochondrial DNA / Anthozoa / Escherichia coli / Animals / Molecular Phylogenetics and Evolution / nuclear DNA / Molecular phylogenetics / Deep water / Secondary Structure / Maximum Parsimony / Base Sequence / SSU rRNA / Nucleic Acid Conformation / DNA sequence / Molecular Sequence Data / Scanning Electron Microscopy / DNA / Phylogeny / Mitochondrial DNA / Anthozoa / Escherichia coli / Animals / Molecular Phylogenetics and Evolution / nuclear DNA / Molecular phylogenetics / Deep water / Secondary Structure / Maximum Parsimony / Base Sequence / SSU rRNA / Nucleic Acid Conformation / DNA sequence / Molecular Sequence Data

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Mitochondrial DNA phylogeography of lake cisco (Coregonus artedi): evidence supporting extensive secondary contacts between two glacial races

Geography / Polymorphism / Phylogeography / Population Genetics / Molecular Evolution / Molecular Ecology / Biological Sciences / Colonization / Phylogeny / mtDNA / Mitochondrial DNA / Haplotypes / Animals / Dispersal / Freshwater Fish / North America / Geographic distribution / FISH FAUNA / Salmonidae / Hudson Bay / Salinity Tolerance / Nucleic Acid Conformation / Molecular Ecology / Biological Sciences / Colonization / Phylogeny / mtDNA / Mitochondrial DNA / Haplotypes / Animals / Dispersal / Freshwater Fish / North America / Geographic distribution / FISH FAUNA / Salmonidae / Hudson Bay / Salinity Tolerance / Nucleic Acid Conformation

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A nucleotide-level coarse-grained model of RNA

Engineering / Thermodynamics / RNA / Nanotechnology / Chemical Physics / DNA / Physical sciences / CHEMICAL SCIENCES / Nucleic Acid Conformation / Nucleotides / DNA / Physical sciences / CHEMICAL SCIENCES / Nucleic Acid Conformation / Nucleotides

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A nucleotide-level coarse-grained model of RNA

Engineering / Thermodynamics / RNA / Nanotechnology / Chemical Physics / DNA / Physical sciences / CHEMICAL SCIENCES / Nucleic Acid Conformation / Nucleotides / DNA / Physical sciences / CHEMICAL SCIENCES / Nucleic Acid Conformation / Nucleotides

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